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Table 5 Partial review of literature on detection of phenotypic factors related to pathogenic CNVs in patients with NDD and/or MCA

From: Prematurity, ventricular septal defect and dysmorphisms are independent predictors of pathogenic copy number variants: a retrospective study on array-CGH results and phenotypical features of 293 children with neurodevelopmental disorders and/or multiple congenital anomalies

References

N° pt

Main Phenotype

Technique

Detection rate pathogenic CNVs

Clinical variables associated to pathogenic CNVs

Independent predictors of pathogenic CNVs

Caballero Pérez et al. [15]

80

DD, ID

27.5%

- Positive family history for DD/ID

- Malformations

- > n° 3 dysmorphisms

- Hypotonia

Cappuccio et al. [14]

214

ID, ASD, M

Oligo (500Kb e 50-75Kb)

30%

- ASD

- Positive family history for ID/ASD/MCA

- ID

- Positive family history for ID

- cutaneous dyschromia

Preiksaitiene et al. [17]

211

DD, ID

Oligo 44 K, 400 K, 105 K

SNP 300 K, 700 K

(−)

13.7%

- Cerebral malformations (CC)

- Hydrocephalus

- Dysmorphisms (down slanting palpebral fissures, ears, micrognathia)

- Brachydactyly

-Umbilical hernia

- “coffee and milk” spots

- Congenital anomalies of corpus callosus

- Ear dysmorphisms

- Brachydactyly

Caramaschi et al. [18]

116

DD, ID + E/ M/D

Oligo 44 K

(−)

23.3%

- Early onset symptoms (< 1 y)

- Dysmorphisms

- Malformations

- Dysmorphisms

- Malformations

D’Arrigo et al. [16]

329

DD, ID

Oligo 4x180K

(40 Kb)

16%

- Positive family history for DD/ID

- IUGR

- Face Dysmorphisms

- Positive family history for DD/ID

- IUGR

- Facies Dysmorphisms

Shoukier et al. [20]

342

DD, ID, M

Oligo 244 K

4x180K

13.2%

- Congenital anomalies (heart)

Roselló et al. [19]

246

DD, ID + M, D

BAC (0.5–1 Mb)

Oligo 44 K

(50–150 Kb)

29.7%

- Somatic overgrowth

- Dysmorphisms (low set ears, hypertelorism, II-V finger anomalies)

- Genital anomalies

- VSD

Our study

339

DD, ID, ASD, M, D

Oligo 6x80K

(100 Kb)a

20.6%

- DD/ID

- Prematurity, IUGR

- Hypotonia

- Congenital heart anomalies

- Cerebral malformations

- Face and hand dysmorphisms

- Prematurity

- VSD

- Dysmorphisms

  1. ASD autism spectrum disorder, D dysmorphisms, DD developmental delay, ID intellectual disability, E epilepsy, M malformations
  2. atechnique and resolution most commonly used in the sample of our study