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Table 4 Changes in treatment of children with mNGS

From: Clinical Evaluation of Metagenomic Next-Generation Sequencing for the detection of pathogens in BALF in severe community acquired pneumonia

Patient no

mNGS-based diagnosis

Change the treatment

02

Mycobacterium tuberculosis

Add anti tuberculosis drugs

05

Streptococcus pneumoniae

Haemophilus influenzae

Cryptococcus neoformans

Proximate smooth candida

Add Fluconazole

07

Staphylococcus aureus

Latamoxef Sodium change to Linezolid

11

Streptococcus pneumoniae

Klebsiella pneumoniae

Pneumocystis yersini

Latamoxef Sodium change to Linezolid and add Sulfamethoxazole

19

Streptococcus pneumoniae

MP

Latamoxef Sodium change to Linezolid

22

Streptococcus pneumoniae

Pneumocystis yersini

MP

Add Sulfamethoxazole and Azithromycin

25

Streptococcus pneumoniae

Haemophilus influenzae

Latamoxef Sodium Chane to Piperacillin and Tazobactam

31

Streptococcus pneumoniae

Latamoxef Sodium Change to Ertapenem

36

Streptococcus pneumoniae

EBV

Add Duffy

39

Bocavirus

Add Duffy

42

Boca virus

Add Duffy

43

Enterobacter cloacae

Add Cefoperazone

44

Klebsiella pneumoniae

Enterobacter cloacae

Add Cefoperazone

45

Haemophilus influenzae

Candida albicans

Add Fluconazole

49

Streptococcus pneumoniae

Latamoxef Sodium Change to Linezolid

50

Escherichia coli

Latamoxef Sodium Change to Cefoperazone

53

Excrement enterococcus

Pseudomonas aeruginosa

Add Linezolid

58

Rhinovirus

Construct nests aspergillus

Add Fluconazole and Duffy

60

Haemophilus influenzae

RSV

Latamoxef Sodium Change to Cefoperazone and add Duffy

62

Staphylococcus aureus

Candida albicans

Latamoxef Sodium Change to Linezolid and add Fluconazole

68

Bocavirus

Add Duffy

70

Pneumocystis vulgaris

Add Sulfamethoxazole

72

Aspergillus Niger

Add Fluconazole

76

Bocavirus

Add Duffy

77

Chlamydia

Add Etoerythromycin

82

Pneumocystis vulgaris

Add Sulfamethoxazole

  1. mNGS Metagenomic Next-generation sequencing, CT Conventional technology, MP Mycoplasma, EBV Epstein-Barr virus, RSV Respiratory syncytial virus, ADV Adenovirus, MRSA Methicillin resistant Staphylococcus aureus