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Table 1 Comparison of present patient phenotype with that of interstitial deletions of chromosome 1p

From: Interstitial deletions of chromosome 1p: novel 1p31.3p22.2 microdeletion in a newborn with craniosynostosis, coloboma and cleft palate, and review of the genomic and phenotypic profiles

 

Respiratory

Cardiovascular

Ear, nose, throat

Gastrointestinal

Infectious diseases

Endocrinology

Nephrology

Ophthalmology

Neurology

Musculoskeletal, skin

Genital anomalies

Genetics

Methods

Present patient

Respiratory distress

Pulmonary hypertension, patent foramen ovale

Broad and depressed nasal root, bulbous tip, anteverted nares, prominent columella, long and hypoplastic philtrum;

thin lips with “M” shaped mouth, cleft palate, incisions of the upper gingival mucosa, microretrognathia;

cupped and small ears (with low-set of the left one) with thick helix, bilateral moderate sensorineural hypoacusis

Hypertrophy of the left hepatic segments, dysmorphic gallbladder

No infection diagnosed

No hormonal defects

No urinary tract abnormalities

Hypotelorism, bilateral microphthalmia, convergent strabismus, epicanthal folds, narrow and down slanting palpebral fissures, bilateral coloboma of iris and optic nerve, arteriovenous shunts of the retinal vessels

Severe global developmental delay, isolated moderate widening of the III ventricle, kinked corpus callosum

High forehead, frontal bossing, brachycephaly with flattened occiput, round face, pectus excavatum, widely spaced nipples, bilateral adducted thumbs, talipes calcaneovalgus and crowded toes (broad first, proximal position of the second and clinodactyly of the fourth and fifth ones) with nail dysplasia

No abnormalities

1p31.3-p22.2 deletion of 20.7 Mb (from 67,721,572 to 88,415,438), inherited from the healthy mother, carrier of a smaller (2.6 Mb) deletion within the same rearrangement of the daughter (1p22.3p22.2) and with overlapping centromeric breakpoint (from 85,869,876 to 88,477,895), in addition to a translocation t(4;1)(q35;p31.1p31.1)

aCGH

Yieh et al., 2019 [13]

Twin A

Abnormal lobation of lungs (right lung with 1 fissure, left lung with no fissures)

Cardiomegaly, 2 midmuscular ventricular septal

defects, high ostium secundum atrial septal defect,

patent ductus arteriosus

Macroglossia, cleft palate, microretrognathia, low set

ears, anteverted nostrils

Meconium plugs,

surgical necrotizing enterocolitis, hypoplastic spleen No congenital heart malformations

No infection diagnosed

Hypoplastic adrenal glands, presumed cortisol

deficiency

Bilateral simple cysts, salt‐wasting nephropathy, hypercalciuria,

hematuria

Right eye optic nerve and retinal coloboma

Corpus callosum dysgenesis, ventriculomegaly, cortical

or subcortical calcifications within the right frontal

and parietal lobes, possible tethered spinal cord

Abnormal skeletal proportions with smaller than expected

crown‐rump and crown‐heel length, small hand

length, asymmetric clefts within the right aspects of

the S3 and S4 vertebral bodies, widely spaced nipples,

bifid left hand 5th digit

No abnormalities

1p22.2-p32.2 deletion

of 31.67 Mb

SNP-microarray

Yieh et al., 2019 [13]

Twin B

Chronic lung disease, concern for airway malformation

Multiple small midanterior muscular ventricular septal defects,

patent ductus arteriosus, pulmonary hypertension, ostium

secundum ASD

Macroglossia, retroflexed epiglottis, retrodisplaced base of

tongue, cleft of hard and soft palate, retrognathia, low set ears

Suspected Hirschsprung's disease, surgical necrotizing

enterocolitis

Enterobacter pyelonephritis, MDR E. coli pyelonephritis

Low vitamin D, hypocalcemia, normal ACTH stimulation test

Bilateral simple cysts, salt‐wasting nephropathy, nephrocalcinosis,

hematuria

Pale, hypoplastic optic nerves

Macrocephaly, ventriculomegaly, agenesis of the corpus

callosum, subcortical punctate calcifications, diffusely abnormal

gyral pattern, hypoplastic chiasm, tethered spinal cord,

bilateral grade 3/4 IVH

Widely spaced nipples, shortened humeri, triphalangeal right

1st digit

No abnormalities

1p22.2-p32.2 deletion of 31.66 Mb

SNP-microarray

Rivera-Pedroza et al., 2017 [5]

No respiratory problems

No congenital heart malformations

Cleft palate,

low-set ears,

micrognathia

No gastrointestinal anomalies

Respiratory tract infection

No hormonal defects

Bilateral hypoplasia with abnormal

cortical echogenicity and altered corticomedullary differentiation

Hypotelorism and severe exophthalmos, absence of eyelids, ectopia lentis, sclerocornea

Biventricular enlargement, collapse of the third and fourth ventricles, small

posterior fossa, focal intracerebral hemorrhage in the left temporal

lobe, obstructive hydrocephalus with enlargement of temporal regions

Prominent midfrontal line, cloverleaf skull,

cutis laxa

No abnormalities

1p31.1-p31.3 deletion of 18.6 Mb (63,871,758–

82,484,133)

SNP-microarray and MLPA

Thakur et al., 2017 [23]

Respiratory

Distress

Patent foramen ovale

Flat nasal bridge with anteverted nostrils; small, low-set, posteriorly

rotated ears with overfolded helices; long philtrum, micrognathia, high arched

palate

Severe bilateral sensorineural hearing loss

No

gastrointestinal anomalies

No infection diagnosed

Hypopituitarism

No abnormalities

Hypotelorism, almond-shaped eyes, infraorbital creases

Absence of the septum pellucidum, mild lobularity of the medial cortical surfaces, ventricular enlargement,

several periventricular cystic areas, diminutive sella, ectopic posterior

pituitary gland, nonvisualization of the anterior pituitary gland, hypoplastic corpus callosum,

global developmental delay

Trigonocephaly with a prominent brow and metopic ridge; widely spaced, hypoplastic nipples,

clenched hands with deep palmar creases and long-appearing fingers; fifth digit

clinodactyly of both feet, sacral dimple

Small scrotum and phallus; unilateral cryptorchidism

1p31.1-p31.3 deletion of

8.04 Mb

SNP-microarray

Labonne et al., 2016 [21]

No respiratory problems

No congenital heart malformations

Macrocephaly, prominent forehead, frontal bossing,

low-set ears,

narrow nose and thin

lips

No gastrointestinal anomalies

No infection diagnosed

No hormonal defects

No abnormalities

No anomalies

Developmental delay, intellectual disability,

subarachnoid intraventricular hemorrhage with layering in the posterior fossa, right anterior communicating artery

aneurysm, ADHD

No anomalies

No abnormalities

1p31.3-p32.2 deletion of

9.45 Mb (57,633,718- 67,087,056)

microarray

  1. aCGH array comparative genomic hybridization, ADHD attention deficit hyperactivity disorder, ASD atrial septal defect, FISH fluorescence in situ hybridization, IVH intraventricular hemorrhage, MDR multidrug resistant, MLPA multiplex ligation-dependent probe amplification, SNP single nucleotide polymorphism